[INFO] cloning repository https://github.com/nucleohub/biobit
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/nucleohub/biobit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnucleohub%2Fbiobit", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnucleohub%2Fbiobit'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 046d996c5751940fd737d570b8fd3e8635cd6155
[INFO] checking nucleohub/biobit against master#158f00a1c5175648af6f6099b075f78d1d014a28 for pr-121251
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnucleohub%2Fbiobit" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/nucleohub/biobit on toolchain 158f00a1c5175648af6f6099b075f78d1d014a28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+158f00a1c5175648af6f6099b075f78d1d014a28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/nucleohub/biobit
[INFO] finished tweaking git repo https://github.com/nucleohub/biobit
[INFO] tweaked toml for git repo https://github.com/nucleohub/biobit written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/nucleohub/biobit already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+158f00a1c5175648af6f6099b075f78d1d014a28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded hash32 v0.2.1
[INFO] [stderr]   Downloaded num v0.4.0
[INFO] [stderr]   Downloaded float_next_after v1.0.0
[INFO] [stderr]   Downloaded atomic-polyfill v0.1.11
[INFO] [stderr]   Downloaded geographiclib-rs v0.2.3
[INFO] [stderr]   Downloaded critical-section v1.1.1
[INFO] [stderr]   Downloaded geo-types v0.7.11
[INFO] [stderr]   Downloaded rstar v0.10.0
[INFO] [stderr]   Downloaded serde v1.0.159
[INFO] [stderr]   Downloaded libm v0.2.6
[INFO] [stderr]   Downloaded heapless v0.7.16
[INFO] [stderr]   Downloaded syn v2.0.13
[INFO] [stderr]   Downloaded geo v0.25.1
[INFO] [stderr]   Downloaded earcutr v0.4.2
[INFO] [stderr]   Downloaded serde_derive v1.0.159
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+158f00a1c5175648af6f6099b075f78d1d014a28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 906c3bc28cdc2f9edd1a2649654be7a0fca61b998523d5902fafae1595576181
[INFO] running `Command { std: "docker" "start" "-a" "906c3bc28cdc2f9edd1a2649654be7a0fca61b998523d5902fafae1595576181", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "906c3bc28cdc2f9edd1a2649654be7a0fca61b998523d5902fafae1595576181", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "906c3bc28cdc2f9edd1a2649654be7a0fca61b998523d5902fafae1595576181", kill_on_drop: false }`
[INFO] [stdout] 906c3bc28cdc2f9edd1a2649654be7a0fca61b998523d5902fafae1595576181
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+158f00a1c5175648af6f6099b075f78d1d014a28" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 25da54927c829da4709a40fba9d6be9a46e9b723ec70e4689ca2e5b2acb1b43c
[INFO] running `Command { std: "docker" "start" "-a" "25da54927c829da4709a40fba9d6be9a46e9b723ec70e4689ca2e5b2acb1b43c", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling semver v1.0.17
[INFO] [stderr]     Checking either v1.8.1
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]     Checking stable_deref_trait v1.2.0
[INFO] [stderr]     Checking smallvec v1.10.0
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking robust v0.2.3
[INFO] [stderr]     Checking float_next_after v1.0.0
[INFO] [stderr]     Checking geographiclib-rs v0.2.3
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking hash32 v0.2.1
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling lock_api v0.4.9
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling num-iter v0.1.43
[INFO] [stderr]    Compiling rustc_version v0.4.0
[INFO] [stderr]     Checking spin v0.9.8
[INFO] [stderr]    Compiling heapless v0.7.16
[INFO] [stderr]     Checking biobit-core v0.0.2 (/opt/rustwide/workdir/modules/core)
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-complex v0.4.3
[INFO] [stderr]     Checking rstar v0.10.0
[INFO] [stderr]     Checking earcutr v0.4.2
[INFO] [stderr]     Checking geo-types v0.7.11
[INFO] [stderr]     Checking geo v0.25.1
[INFO] [stderr]     Checking num v0.4.0
[INFO] [stderr]     Checking biobit-alignment v0.0.2 (/opt/rustwide/workdir/modules/alignment)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2.90s
[INFO] running `Command { std: "docker" "inspect" "25da54927c829da4709a40fba9d6be9a46e9b723ec70e4689ca2e5b2acb1b43c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "25da54927c829da4709a40fba9d6be9a46e9b723ec70e4689ca2e5b2acb1b43c", kill_on_drop: false }`
[INFO] [stdout] 25da54927c829da4709a40fba9d6be9a46e9b723ec70e4689ca2e5b2acb1b43c
[INFO] checking nucleohub/biobit against try#b4fc5dbf0bc33be331f9d893db5b3a794f29724a+rustflags=-Dexplicit_range -Dtrait_impl_range -Wrange_syntax -Wrange_bounds for pr-121251
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnucleohub%2Fbiobit" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/nucleohub/biobit on toolchain b4fc5dbf0bc33be331f9d893db5b3a794f29724a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b4fc5dbf0bc33be331f9d893db5b3a794f29724a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/nucleohub/biobit
[INFO] finished tweaking git repo https://github.com/nucleohub/biobit
[INFO] tweaked toml for git repo https://github.com/nucleohub/biobit written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/nucleohub/biobit already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b4fc5dbf0bc33be331f9d893db5b3a794f29724a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+b4fc5dbf0bc33be331f9d893db5b3a794f29724a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5ee6de3e373ac26561924a4fb13867802258321a88841773815a256c93a11a3c
[INFO] running `Command { std: "docker" "start" "-a" "5ee6de3e373ac26561924a4fb13867802258321a88841773815a256c93a11a3c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5ee6de3e373ac26561924a4fb13867802258321a88841773815a256c93a11a3c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5ee6de3e373ac26561924a4fb13867802258321a88841773815a256c93a11a3c", kill_on_drop: false }`
[INFO] [stdout] 5ee6de3e373ac26561924a4fb13867802258321a88841773815a256c93a11a3c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dexplicit_range -Dtrait_impl_range -Wrange_syntax -Wrange_bounds" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+b4fc5dbf0bc33be331f9d893db5b3a794f29724a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ffefc2892f93fd11950f5f6e53a7963f4eaaa01d7173af71b37d65a5fd135185
[INFO] running `Command { std: "docker" "start" "-a" "ffefc2892f93fd11950f5f6e53a7963f4eaaa01d7173af71b37d65a5fd135185", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling semver v1.0.17
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]     Checking either v1.8.1
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]     Checking stable_deref_trait v1.2.0
[INFO] [stderr]     Checking smallvec v1.10.0
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking robust v0.2.3
[INFO] [stderr]     Checking float_next_after v1.0.0
[INFO] [stderr]     Checking geographiclib-rs v0.2.3
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking hash32 v0.2.1
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling lock_api v0.4.9
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling num-iter v0.1.43
[INFO] [stderr]    Compiling rustc_version v0.4.0
[INFO] [stderr]     Checking spin v0.9.8
[INFO] [stderr]    Compiling heapless v0.7.16
[INFO] [stderr]     Checking biobit-core v0.0.2 (/opt/rustwide/workdir/modules/core)
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-complex v0.4.3
[INFO] [stderr]     Checking earcutr v0.4.2
[INFO] [stderr]     Checking rstar v0.10.0
[INFO] [stderr]     Checking geo-types v0.7.11
[INFO] [stderr]     Checking geo v0.25.1
[INFO] [stderr]     Checking num v0.4.0
[INFO] [stderr]     Checking biobit-alignment v0.0.2 (/opt/rustwide/workdir/modules/alignment)
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:34:26
[INFO] [stdout]    |
[INFO] [stdout] 34 |                 for _ in 0..x.len {
[INFO] [stdout]    |                          ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: requested on the command line with `-W range-syntax`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:44:34
[INFO] [stdout]    |
[INFO] [stdout] 44 |                         for _ in 0..(len / (u8::MAX as usize)) {
[INFO] [stdout]    |                                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:61:30
[INFO] [stdout]    |
[INFO] [stdout] 61 |                     for _ in 0..(len / (u8::MAX as usize)) {
[INFO] [stdout]    |                              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:99:30
[INFO] [stdout]    |
[INFO] [stdout] 99 |                 seq2 = &seq2[len..];
[INFO] [stdout]    |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:102:41
[INFO] [stdout]     |
[INFO] [stdout] 102 |                 lines[0].push_str(&seq1[len..]);
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:105:30
[INFO] [stdout]     |
[INFO] [stdout] 105 |                 seq1 = &seq1[len..];
[INFO] [stdout]     |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:108:41
[INFO] [stdout]     |
[INFO] [stdout] 108 |                 lines[0].push_str(&seq1[len..]);
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:109:41
[INFO] [stdout]     |
[INFO] [stdout] 109 |                 lines[2].push_str(&seq2[len..]);
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:111:30
[INFO] [stdout]     |
[INFO] [stdout] 111 |                 seq1 = &seq1[len..];
[INFO] [stdout]     |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:112:30
[INFO] [stdout]     |
[INFO] [stdout] 112 |                 seq2 = &seq2[len..];
[INFO] [stdout]     |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/mod.rs:136:26
[INFO] [stdout]     |
[INFO] [stdout] 136 |         let seq1 = &seq1[self.seq1.start..self.seq1.end];
[INFO] [stdout]     |                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/mod.rs:137:26
[INFO] [stdout]     |
[INFO] [stdout] 137 |         let seq2 = &seq2[self.seq2.start..self.seq2.end];
[INFO] [stdout]     |                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:34:26
[INFO] [stdout]    |
[INFO] [stdout] 34 |                 for _ in 0..x.len {
[INFO] [stdout]    |                          ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: requested on the command line with `-W range-syntax`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/sw/algo/local.rs:93:29
[INFO] [stdout]    |
[INFO] [stdout] 93 |         self.scores.extend((0..seq1.len() - skip_last).map(|row| {
[INFO] [stdout]    |                             ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:123:20
[INFO] [stdout]     |
[INFO] [stdout] 123 |         for col in 1..(seq2.len() - offset) {
[INFO] [stdout]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:141:24
[INFO] [stdout]     |
[INFO] [stdout] 141 |             for row in 1..(seq1.len() - col - offset) {
[INFO] [stdout]     |                        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:210:20
[INFO] [stdout]     |
[INFO] [stdout] 210 |         for col in 1..seq2.len() {
[INFO] [stdout]     |                    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:44:34
[INFO] [stdout]    |
[INFO] [stdout] 44 |                         for _ in 0..(len / (u8::MAX as usize)) {
[INFO] [stdout]    |                                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:228:24
[INFO] [stdout]     |
[INFO] [stdout] 228 |             for row in 1..seq1.len() {
[INFO] [stdout]     |                        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:61:30
[INFO] [stdout]    |
[INFO] [stdout] 61 |                     for _ in 0..(len / (u8::MAX as usize)) {
[INFO] [stdout]    |                              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/alignment/utils.rs:99:30
[INFO] [stdout]    |
[INFO] [stdout] 99 |                 seq2 = &seq2[len..];
[INFO] [stdout]    |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/sw/traceback/tracemat.rs:54:18
[INFO] [stdout]    |
[INFO] [stdout] 54 |         for _ in 0..(self.len / (u8::MAX as usize)) {
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:102:41
[INFO] [stdout]     |
[INFO] [stdout] 102 |                 lines[0].push_str(&seq1[len..]);
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:105:30
[INFO] [stdout]     |
[INFO] [stdout] 105 |                 seq1 = &seq1[len..];
[INFO] [stdout]     |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:108:41
[INFO] [stdout]     |
[INFO] [stdout] 108 |                 lines[0].push_str(&seq1[len..]);
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:109:41
[INFO] [stdout]     |
[INFO] [stdout] 109 |                 lines[2].push_str(&seq2[len..]);
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:111:30
[INFO] [stdout]     |
[INFO] [stdout] 111 |                 seq1 = &seq1[len..];
[INFO] [stdout]     |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `RangeFrom` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/utils.rs:112:30
[INFO] [stdout]     |
[INFO] [stdout] 112 |                 seq2 = &seq2[len..];
[INFO] [stdout]     |                              ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/mod.rs:136:26
[INFO] [stdout]     |
[INFO] [stdout] 136 |         let seq1 = &seq1[self.seq1.start..self.seq1.end];
[INFO] [stdout]     |                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/mod.rs:137:26
[INFO] [stdout]     |
[INFO] [stdout] 137 |         let seq2 = &seq2[self.seq2.start..self.seq2.end];
[INFO] [stdout]     |                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/sw/algo/local.rs:93:29
[INFO] [stdout]    |
[INFO] [stdout] 93 |         self.scores.extend((0..seq1.len() - skip_last).map(|row| {
[INFO] [stdout]    |                             ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:123:20
[INFO] [stdout]     |
[INFO] [stdout] 123 |         for col in 1..(seq2.len() - offset) {
[INFO] [stdout]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:141:24
[INFO] [stdout]     |
[INFO] [stdout] 141 |             for row in 1..(seq1.len() - col - offset) {
[INFO] [stdout]     |                        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:210:20
[INFO] [stdout]     |
[INFO] [stdout] 210 |         for col in 1..seq2.len() {
[INFO] [stdout]     |                    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]    --> modules/alignment/src/pairwise/sw/algo/local.rs:228:24
[INFO] [stdout]     |
[INFO] [stdout] 228 |             for row in 1..seq1.len() {
[INFO] [stdout]     |                        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: usage of `Range` range syntax
[INFO] [stdout]   --> modules/alignment/src/pairwise/sw/traceback/tracemat.rs:54:18
[INFO] [stdout]    |
[INFO] [stdout] 54 |         for _ in 0..(self.len / (u8::MAX as usize)) {
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: explicit usage of `Range` type in public struct field
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/mod.rs:122:15
[INFO] [stdout]     |
[INFO] [stdout] 122 |     pub seq1: Range<usize>,
[INFO] [stdout]     |               ^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: requested on the command line with `-D explicit-range`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: explicit usage of `Range` type in public struct field
[INFO] [stdout]    --> modules/alignment/src/pairwise/alignment/mod.rs:123:15
[INFO] [stdout]     |
[INFO] [stdout] 123 |     pub seq2: Range<usize>,
[INFO] [stdout]     |               ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: explicit usage of `Range` type in public struct field
[INFO] [stdout]   --> modules/alignment/src/pairwise/sw/traceback/mod.rs:12:15
[INFO] [stdout]    |
[INFO] [stdout] 12 |     pub seq1: Range<usize>,
[INFO] [stdout]    |               ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: explicit usage of `Range` type in public struct field
[INFO] [stdout]   --> modules/alignment/src/pairwise/sw/traceback/mod.rs:13:15
[INFO] [stdout]    |
[INFO] [stdout] 13 |     pub seq2: Range<usize>,
[INFO] [stdout]    |               ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 18 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 4 previous errors; 18 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `biobit-alignment` (lib) due to 5 previous errors; 18 warnings emitted
[INFO] running `Command { std: "docker" "inspect" "ffefc2892f93fd11950f5f6e53a7963f4eaaa01d7173af71b37d65a5fd135185", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ffefc2892f93fd11950f5f6e53a7963f4eaaa01d7173af71b37d65a5fd135185", kill_on_drop: false }`
[INFO] [stdout] ffefc2892f93fd11950f5f6e53a7963f4eaaa01d7173af71b37d65a5fd135185
